STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608686Dr1-associated corepressor-like. (227 aa)    
Predicted Functional Partners:
dr1
Protein Dr1.
   
 
 0.964
nc2b
Dr1.
   
 
 0.964
LOC106604898
TATA-binding protein-associated factor 172-like.
    
 
 0.948
LOC106576794
TATA-binding protein-associated factor 172-like.
    
 
 0.948
tbp
TATA-box-binding protein isoform X1.
    
 
 0.939
LOC106602273
TATA box-binding protein-like protein 2.
    
 
 0.939
LOC106611245
TATA-box-binding protein 2-like.
    
 
 0.939
LOC106589653
TATA-box-binding protein-like.
    
 
 0.939
tbpl1
TATA box-binding protein-like protein 1.
    
 
 0.903
LOC106579553
Forkhead box protein H1-like isoform X2.
    
 0.851
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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