STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASP2Caspase-2-like; Belongs to the peptidase C14A family. (343 aa)    
Predicted Functional Partners:
LOC106609292
Death domain-containing protein CRADD-like.
    
 0.921
LOC106576178
Death domain-containing protein CRADD-like.
    
 0.921
LOC106584781
P53-induced death domain-containing protein 1-like.
    
 0.905
LOC106576445
Apoptotic protease-activating factor 1-like isoform X1.
    
 0.862
LOC106609566
Apoptotic protease-activating factor 1-like isoform X1.
    
 0.862
cenpp
Centromere protein P.
   
 0.803
ENSSSAP00000062401
annotation not available
   
 0.790
LOC106588856
Non-syndromic hearing impairment protein 5-like isoform X1.
     
 0.769
LOC106570529
Non-syndromic hearing impairment protein 5-like.
     
 0.769
LOC106612162
Baculoviral IAP repeat-containing protein 4.
    
 0.768
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.