STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608684Putative transcription factor p65 homolog. (591 aa)    
Predicted Functional Partners:
relb
Transcription factor RelB isoform X1.
  
  
0.985
LOC106607598
NF-kappa-B inhibitor alpha-like.
   
 0.984
LOC106571222
NF-kappa-B inhibitor alpha-like.
   
 0.984
LOC106611175
NF-kappa-B inhibitor alpha-like.
   
 0.984
LOC106601178
NF-kappa-B inhibitor alpha-like.
   
 0.984
LOC106604768
Nuclear factor NF-kappa-B p105 subunit-like isoform X1.
   
0.980
ikbe
NF-kappa-B inhibitor epsilon.
   
 0.964
nfkbie
NF-kappa-B inhibitor epsilon.
   
 0.964
LOC106570815
Interleukin-1.
   
 
 0.936
LOC100136449
Interleukin-1.
   
 
 0.936
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.