STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605032Malic enzyme. (605 aa)    
Predicted Functional Partners:
FH
Fumarate hydratase, mitochondrial-like.
  
 
 0.987
LOC100194641
Malate dehydrogenase.
  
 0.985
LOC106603157
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 0.983
LOC100196673
Malate dehydrogenase.
  
 0.982
LOC106577388
Malate dehydrogenase.
  
 0.975
LOC106593044
Malate dehydrogenase.
  
 0.975
LOC106585868
Malate dehydrogenase.
  
 0.971
LOC106564857
Malate dehydrogenase.
  
 0.971
LOC106593429
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.968
kpyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.964
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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