STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106593742Phospholipase A(2). (175 aa)    
Predicted Functional Partners:
LOC106573641
Group XV phospholipase A2-like.
     
 0.754
lypa3
1-O-acylceramide synthase precursor.
     
 0.754
LOC106571632
Phospholipase B1, membrane-associated-like.
     
 0.744
LOC106608185
Phospholipase B1, membrane-associated-like isoform X1.
     
 0.744
LOC106599098
Prostaglandin G/H synthase 2-like.
     
 0.738
PTGS2
Prostaglandin G/H synthase 2.
     
 0.738
LOC106560558
Prostaglandin G/H synthase 2-like.
     
 0.738
LOC106583970
Prostaglandin G/H synthase 2-like isoform X1.
     
 0.738
pgh1
Prostaglandin G/H synthase 1 isoform X1.
     
 0.712
LOC106571610
Platelet-activating factor acetylhydrolase.
     
 0.712
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.