STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608419SH3 domain-containing protein 19-like. (713 aa)    
Predicted Functional Partners:
LOC100194664
Vps20-associated 1 like 1 isoform X1.
    
   0.618
LOC106571414
Vacuolar protein sorting-associated protein VTA1 homolog.
    
   0.618
ENSSSAP00000009856
annotation not available
   
   0.576
ENSSSAP00000027929
annotation not available
   
   0.576
LOC106604179
SH3 domain-containing YSC84-like protein 1 isoform X4.
   
   0.576
LOC106612148
Clathrin interactor 1-like isoform X1.
     
 0.564
LOC106604281
Clathrin interactor 1-like.
     
 0.564
LOC106567442
Clathrin interactor 1-like isoform X1.
     
 0.564
epn4
Clathrin interactor 1.
     
 0.564
gak
cyclin-G-associated kinase isoform X1.
     
 0.555
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.