STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mlf2Myeloid leukemia factor 2-like isoform X2. (248 aa)    
Predicted Functional Partners:
n6amt1
hemK methyltransferase family member 2 isoform X1.
      
 0.598
polr2c
DNA-directed RNA polymerase II subunit RPB3.
   
  
 0.526
ENSSSAP00000034961
Polymerase (RNA) II (DNA directed) polypeptide C.
   
  
 0.526
gfm1
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]
      
 0.524
LOC106565640
Rootletin-like isoform X2.
      
 0.511
CROCC
Rootletin-like isoform X1.
      
 0.511
bag5
BAG family molecular chaperone regulator 5 isoform X1.
    
 
 0.490
LOC106610958
BAG family molecular chaperone regulator 5-like isoform X2.
    
 
 0.490
LOC106570066
N(G),N(G)-dimethylarginine dimethylaminohydrolase 2-like.
      
 0.483
ddah2
N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 isoform X1.
      
 0.483
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.