STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clic4Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. (252 aa)    
Predicted Functional Partners:
LOC100136484
Glutathione S-transferase P; Belongs to the GST superfamily.
    
 
 0.566
LOC106611535
Glutathione S-transferase P-like isoform X1.
    
 
 0.566
LOC106570069
Uncharacterized protein LOC106570069.
    
 0.565
ENSSSAP00000110677
annotation not available
    
 0.565
LOC106611534
Glutathione S-transferase P-like.
      
 0.538
clcb
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
      
 0.491
nudt7
Peroxisomal coenzyme A diphosphatase NUDT7 isoform X1.
      
 0.491
ush2a
LOW QUALITY PROTEIN: usherin.
      
 0.447
LOC106611523
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
  
 
 
0.439
rpgrip1l
Protein fantom.
      
 0.431
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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