STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1cbSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (354 aa)    
Predicted Functional Partners:
wdr33
pre-mRNA 3' end processing protein WDR33 isoform X1.
   
 0.969
LOC106612676
Protein phosphatase 1 regulatory subunit 14A-like.
     
 0.959
cpsf3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.953
LOC106565976
WD repeat-containing protein 82.
   
 0.946
LOC106582800
WD repeat-containing protein 82-like isoform X1.
   
 0.946
WDR82
WD repeat-containing protein 82-like.
   
 0.946
LOC106565219
Myosin regulatory light chain 2, smooth muscle isoform.
    
 0.942
LOC106567035
Myosin light polypeptide 6-like isoform X2.
   
 0.931
CDC25C
M-phase inducer phosphatase 1-B-like isoform X2.
    
 0.921
PPP1R1A
Protein phosphatase 1 regulatory subunit 1A-like isoform X1.
     
 0.918
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.