STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10660570139S ribosomal protein L17, mitochondrial-like isoform X1; Belongs to the bacterial ribosomal protein bL17 family. (169 aa)    
Predicted Functional Partners:
LOC106606250
39S ribosomal protein L12, mitochondrial-like isoform X1.
  
 
 0.999
mrpl9
39S ribosomal protein L9, mitochondrial isoform X1.
  
 
 0.999
mrps6
28S ribosomal protein S6, mitochondrial.
  
 
 0.999
mrpl19
39S ribosomal protein L19, mitochondrial.
  
 
 0.999
rs15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.999
mrpl22
39S ribosomal protein L22, mitochondrial isoform X1; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.998
mrps10
28S ribosomal protein S10, mitochondrial.
  
 
 0.997
mrps11
28S ribosomal protein S11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS11 family.
  
 
 0.997
LOC106612239
39S ribosomal protein L27, mitochondrial-like.
  
 
 0.996
RL23A
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.996
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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