STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610436Zinc finger protein 638-like isoform X1. (1792 aa)    
Predicted Functional Partners:
LOC106563887
Nipped-B protein.
   
 0.699
LOC106585921
Nipped-B protein.
   
 0.699
LOC106609941
Pericentriolar material 1 protein-like isoform X1.
  
   0.643
LOC106602553
Pericentriolar material 1 protein-like isoform X3.
  
   0.643
LOC106578468
U2 snRNP-associated SURP motif-containing protein-like isoform X2.
   
    0.579
ENSSSAP00000056723
Zgc:163098.
   
    0.579
LOC106563440
U2 snRNP-associated SURP motif-containing protein-like isoform X2.
   
    0.579
LOC106590627
U2 snRNP-associated SURP motif-containing protein-like isoform X1.
   
    0.579
ENSSSAP00000048576
annotation not available
  
   0.566
LOC106610694
Sentrin-specific protease 6-like isoform X2.
   
 
 0.551
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.