STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611817Protein HID1-like isoform X1. (854 aa)    
Predicted Functional Partners:
gle1
Nucleoporin GLE1.
   
 
 0.729
ENSSSAP00000028410
annotation not available
    
 
 0.711
LOC106563918
Nuclear pore complex protein Nup155-like isoform X1.
    
 
 0.708
nup54
Nucleoporin p54.
    
 
 0.662
NUP214
Nuclear pore complex protein Nup214-like isoform X2.
    
 
 0.647
usp7
Ubiquitin carboxyl-terminal hydrolase 7.
    
 
 0.617
LOC106606244
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.617
ENSSSAP00000050371
annotation not available
    
 
 0.617
LOC106591177
Ubiquitin carboxyl-terminal hydrolase 7-like.
    
 
 0.617
LOC106575363
Ubiquitin carboxyl-terminal hydrolase 40-like isoform X1; Belongs to the peptidase C19 family.
    
 
 0.617
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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