STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609488Transmembrane protein 184B-like. (434 aa)    
Predicted Functional Partners:
gbrap
Gamma-aminobutyric acid receptor-associated protein.
    
 
 0.580
gabarapl2
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
 
 0.580
LOC106587940
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
 
 0.580
ENSSSAP00000021116
annotation not available
    
 
 0.580
ENSSSAP00000057102
annotation not available
    
 
 0.580
LOC106602900
Gamma-aminobutyric acid receptor-associated protein.
    
 
 0.580
LOC106577557
Gamma-aminobutyric acid receptor-associated protein-like.
    
 
 0.580
kctd14
BTB/POZ domain-containing protein KCTD14 isoform X1.
    
 
 0.511
DPY30
Protein dpy-30 homolog isoform X2.
    
   0.483
LOC106586224
Protein dpy-30 homolog isoform X1.
    
   0.483
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.