STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106591477Protein O-GlcNAcase-like. (730 aa)    
Predicted Functional Partners:
OGT
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X4.
   
 
 0.564
LOC106604253
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform X8.
   
 
 0.564
ttc6
Tetratricopeptide repeat protein 6 isoform X1.
   
 
 0.495
LOC106583042
EGF domain-specific O-linked N-acetylglucosamine transferase-like isoform X2.
      
 0.452
LOC106604595
Nucleophosmin-like.
   
 
 0.437
LOC106592477
Nucleoplasmin ATPase-like.
   
 
 0.437
LOC106563016
Nucleoplasmin ATPase-like.
   
 
 0.437
LOC106611619
Nucleophosmin-like.
   
 
 0.437
mrpl3
39S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family.
    
  0.434
LOC106580540
39S ribosomal protein L41, mitochondrial-like.
    
  0.400
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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