STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106593938Glycine-rich cell wall structural protein 1.0-like isoform X1. (538 aa)    
Predicted Functional Partners:
LOC106575054
Serine/threonine-protein kinase 24-like.
    
 
 0.613
m3k8
Mitogen-activated protein kinase kinase kinase 8.
    
 
 0.613
LOC106602941
Serine/threonine-protein kinase 26-like isoform X1.
    
 
 0.613
LOC106563749
Serine/threonine-protein kinase 26-like.
    
 
 0.613
LOC106578153
Serine/threonine-protein kinase 26-like.
    
 
 0.613
LOC106603954
E3 ubiquitin-protein ligase RNF43-like.
  
 
 
 0.613
LOC106582457
Serine/threonine-protein kinase 24-like.
    
 
 0.613
stk25
Serine/threonine-protein kinase 25 isoform X1.
    
 
 0.613
stk24
Serine/threonine-protein kinase 24.
    
 
 0.613
LOC106578553
Mitogen-activated protein kinase kinase kinase 8-like.
    
 
 0.613
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.