STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hopHomeodomain-only protein. (75 aa)    
Predicted Functional Partners:
ENSSSAP00000062541
Aryl hydrocarbon receptor interacting protein-like 1.
      
 0.723
aip
Peptidylprolyl isomerase.
      
 0.721
tomm20
Mitochondrial import receptor subunit TOM20 homolog.
      
 0.624
LOC106564104
Hsp90 co-chaperone Cdc37-like.
    
 
 0.550
LOC106601286
Hsp90 co-chaperone Cdc37-like.
    
 
 0.549
LOC106607217
Hsp90 co-chaperone Cdc37-like.
    
 
 0.549
hsp90ab1
Heat shock protein HSP 90-beta.
    
 
 0.504
pde2a
Phosphodiesterase.
      
 0.497
LOC106595110
ATP-binding cassette sub-family A member 3-like.
   
  
 0.474
gata4
Transcription factor GATA-4.
    
 0.471
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.