STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etv1ETS translocation variant 1 isoform X4. (481 aa)    
Predicted Functional Partners:
LOC106569074
E3 ubiquitin-protein ligase RFWD2-like isoform X3.
    
 
 0.699
cop1
E3 ubiquitin-protein ligase RFWD2 isoform X1.
    
 
 0.699
det1
DET1 homolog isoform X1.
    
 
 0.679
LOC106560940
DET1 homolog.
    
 
 0.679
LOC106605122
Serine/threonine-protein kinase 40-like.
    
   0.654
LOC106583156
Serine/threonine-protein kinase 40 isoform X2.
    
   0.654
LOC106576767
Homeobox protein OTX1 B-like.
   
  
 0.510
LOC106565793
Nuclear receptor coactivator 3-like isoform X1.
    
 0.488
LOC106579720
Nuclear receptor coactivator 2-like.
    
 0.488
LOC106571447
Nuclear receptor coactivator 1-like.
    
 0.488
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.