STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607991Syntaxin-binding protein 5-like. (1128 aa)    
Predicted Functional Partners:
LOC106611384
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.761
ENSSSAP00000090481
annotation not available
   
 
 0.761
LOC106609608
Exocyst complex component 4-like isoform X1.
   
 
 0.710
LOC100194580
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.663
LOC106580895
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.663
LOC106600503
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 
 0.644
LOC106569598
Protein kinase C iota type-like.
    
 
 0.644
LOC106572815
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 
 0.644
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 
 0.644
snap29
Synaptosomal-associated protein 29-like.
    
 
 0.598
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.