STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601024Phosphoinositide phospholipase C. (1206 aa)    
Predicted Functional Partners:
LOC106563365
pro-MCH 2.
   
 
 0.800
LOC106609478
pro-MCH 2-like.
   
 
 0.800
LOC106576280
Uncharacterized protein LOC106576280 isoform X1.
   
 
 0.800
mch1
Pro-MCH 1 precursor.
   
 
 0.800
ENSSSAP00000013564
annotation not available
   
 0.799
hcrtr2
Orexin receptor type 2; Belongs to the G-protein coupled receptor 1 family.
   
 0.799
ghrl
Preproghrelin-2 precursor.
     
 0.741
LOC106571889
Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.
     
 0.670
trh
Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.
     
 0.670
ENSSSAP00000011251
Neurotensin.
     
 0.623
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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