STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100379103Akirin 2(2a) isoform X1. (181 aa)    
Predicted Functional Partners:
psma5
Proteasome subunit alpha type.
    
   0.892
psmb2
20S proteasome subunit beta 4.
    
   0.675
LOC106588490
Proteasome subunit beta.
    
   0.675
LOC106564948
Proteasome subunit beta type-3-like.
    
   0.671
LOC106587952
Proteasome subunit beta.
    
   0.671
LOC106562664
Proteasome subunit alpha type.
    
   0.649
psma4
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
   0.649
psa4
Proteasome subunit alpha type.
    
   0.649
PSA1
Proteasome subunit alpha type.
    
   0.640
LOC106587501
Proteasome subunit alpha type.
    
   0.640
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.