STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100136438RhAG-like protein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. (420 aa)    
Predicted Functional Partners:
ENSSSAP00000054420
annotation not available
  
 
0.627
LOC106610894
Arginine/serine-rich protein 1-like.
      
 0.598
LOC106610780
Delta-type opioid receptor-like isoform X1; Belongs to the G-protein coupled receptor 1 family.
      
 0.592
LOC106589663
Delta-type opioid receptor-like isoform X1; Belongs to the G-protein coupled receptor 1 family.
      
 0.592
LOC106575861
Kell blood group glycoprotein-like.
   
  
 0.591
ENSSSAP00000042566
annotation not available
  
 
0.587
ENSSSAP00000092376
Rh family, B glycoprotein (gene/pseudogene).
  
 
0.580
rhcg
Ammonium transporter Rh type C; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
  
 
0.579
LOC106573321
Ammonium transporter Rh type C 1; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
  
 
0.579
RHCG
Ammonium transporter Rh type C; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
  
 
0.578
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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