STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100136438RhAG-like protein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. (420 aa)    
Predicted Functional Partners:
LOC106610894
Arginine/serine-rich protein 1-like.
      
 0.718
LOC106575861
Kell blood group glycoprotein-like.
   
  
 0.685
LOC106600435
Aquaporin FA-CHIP-like; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.630
LOC106569327
Aquaporin FA-CHIP-like; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.630
aqp1
Aquaporin-1; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.630
gata1
GATA-binding factor 1.
   
  
 0.629
LOC106610780
Delta-type opioid receptor-like isoform X1; Belongs to the G-protein coupled receptor 1 family.
      
 0.617
LOC106589663
Delta-type opioid receptor-like isoform X1; Belongs to the G-protein coupled receptor 1 family.
      
 0.617
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
  
 0.612
ENSSSAP00000001646
Solute carrier family 26 member 11.
   
  
 0.590
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.