STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601834Poly [ADP-ribose] polymerase. (671 aa)    
Predicted Functional Partners:
LOC106570931
Uncharacterized protein LOC106570931 isoform X1.
   
 0.791
dtx3l
Deltex-3-like isoform X1.
   
 0.791
ifih1
Interferon-induced helicase C domain-containing protein 1 isoform X1.
   
 
 0.728
LOC106567006
Probable E3 ubiquitin-protein ligase DTX3 isoform X1.
   
 0.696
LOC106572698
Probable E3 ubiquitin-protein ligase DTX3 isoform X2.
   
 0.696
rig-I
Retinoic acid-inducible gene-I.
   
 
 0.512
LOC106589450
Poly [ADP-ribose] polymerase 9-like isoform X2.
  
 
0.506
parp16
Poly [ADP-ribose] polymerase.
      
 0.506
parp2
Poly [ADP-ribose] polymerase.
   
 
 0.491
LOC106582088
Poly [ADP-ribose] polymerase.
    
 
 0.483
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.