STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
peca1Platelet endothelial cell adhesion molecule isoform X1. (787 aa)    
Predicted Functional Partners:
LOC106588103
Platelet endothelial cell adhesion molecule-like.
  
  
0.904
ptn6
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.878
LOC106576571
Tyrosine-protein phosphatase non-receptor type 6-like.
   
 0.878
LOC106568295
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.877
LOC106572187
Tyrosine-protein phosphatase non-receptor type 11-like.
   
 0.877
LOC106566948
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.877
LOC106562610
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.877
ctnnb1
Catenin beta-1.
   
 0.798
LOC100380693
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1.
    
 0.754
LOC106560606
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1-like isoform X1.
    
 0.754
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.