STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106594281RNA demethylase ALKBH5-like. (364 aa)    
Predicted Functional Partners:
fto
Alpha-ketoglutarate-dependent dioxygenase FTO isoform X1.
     
 0.862
LOC106587580
Alpha-ketoglutarate-dependent dioxygenase FTO-like.
     
 0.862
ENSSSAP00000021711
annotation not available
   
  
 0.615
mettl14
N6-adenosine-methyltransferase subunit METTL14.
   
  
 0.615
mettl3
N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family.
   
  
 0.608
LOC100196682
Wilms tumor 1 associated protein-like isoform X1.
   
  
 0.607
wtap
pre-mRNA-splicing regulator WTAP isoform X1.
   
  
 0.607
alkbh1
Alkylated DNA repair protein alkB homolog 1 isoform X2.
      
 0.601
ddx46
Probable ATP-dependent RNA helicase DDX46.
      
 0.601
LOC100380651
Protein virilizer homolog.
      
 0.599
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.