STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106594291Smith-Magenis syndrome chromosomal region candidate gene 8 protein-like. (1007 aa)    
Predicted Functional Partners:
LOC106610941
Protein C9orf72-like isoform X1.
    
 0.988
LOC106600466
Protein C9orf72-like.
    
 0.988
wdr41
WD repeat-containing protein 41 isoform X1.
    
 
 0.955
TBK1
Serine/threonine-protein kinase TBK1.
   
 0.935
ulk1
Serine/threonine-protein kinase ULK1 isoform X4.
    
 0.927
LOC106579916
Serine/threonine-protein kinase ULK1-like isoform X4.
    
 0.927
LOC106563157
Serine/threonine-protein kinase ULK1-like isoform X1.
    
 0.927
ULK2
Serine/threonine-protein kinase ULK2-like isoform X1.
    
 0.925
LOC106612954
Serine/threonine-protein kinase ULK2-like isoform X1.
    
 0.925
LOC106586184
TRAF family member-associated NF-kappa-B activator-like isoform X1.
     
 0.914
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.