STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607995Metabotropic glutamate receptor 1-like isoform X2. (1173 aa)    
Predicted Functional Partners:
homer1
Homer protein homolog 1 isoform X1.
    
 0.674
HOMER1
Homer protein homolog 1-like isoform X3.
    
 0.674
HOMER1-2
Homer protein homolog 1-like isoform X1.
    
 0.674
wdr90
WD repeat-containing protein 90.
    
  0.634
homer3
Homer protein homolog 3 isoform X2.
    
 0.625
LOC106568943
Homer protein homolog 3-like isoform X2.
    
 0.625
LOC106599029
Homer protein homolog 3-like isoform X1.
    
 0.625
ENSSSAP00000017985
annotation not available
   
 
 0.527
LOC106582056
EF-hand domain-containing family member B-like isoform X2.
   
   0.490
LOC106570447
Gamma-aminobutyric acid type B receptor subunit 2-like isoform X1.
   
0.476
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.