STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604552Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (399 aa)    
Predicted Functional Partners:
LOC106607439
Parvalbumin-7-like.
      
 0.774
LOC106612164
Beta-2 adrenergic receptor-like.
      
 0.754
LOC106561351
Vimentin-like; Belongs to the intermediate filament family.
      
 0.744
LOC106596074
Vimentin-like; Belongs to the intermediate filament family.
      
 0.723
GOLGA7
Golgin subfamily A member 7-like.
    
 0.693
ENSSSAP00000077084
annotation not available
    
 0.693
goga7
Golgin subfamily A member 7.
    
 0.693
GOLGA7-2
Golgin subfamily A member 7-like.
    
 0.693
LOC106565378
Golgin subfamily A member 7-like.
    
 0.693
PTTG1
Pituitary tumor-transforming 1.
      
 0.656
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.