ENSSSAP00000007337 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSSAP00000007337

Nuclear GTPase SLIP-GC-like. (1139 aa)

Predicted Functional Partners:

LOC106612605

0.744

gsh1

0.744

LOC106588673

0.506

adhfe1

0.473

dkga

0.454

LOC106603097

0.454

kcnab2

0.454

ENSSSAP00000074558

0.454

ENSSSAP00000074813

0.454

LOC100194670

0.454

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000007337	ENSSSAP00000074558	ENSSSAP00000007337	ENSSSAP00000074558	Nuclear GTPase SLIP-GC-like.	Potassium voltage-gated channel, shaker-related subfamily, beta member 2 a.	0.454
ENSSSAP00000007337	ENSSSAP00000074813	ENSSSAP00000007337	ENSSSAP00000074813	Nuclear GTPase SLIP-GC-like.	Potassium voltage-gated channel, shaker-related subfamily, beta member 1 a.	0.454
ENSSSAP00000007337	LOC100194670	ENSSSAP00000007337	ENSSSAP00000075377	Nuclear GTPase SLIP-GC-like.	Aldo-keto reductase family 7 member A5-like.	0.454
ENSSSAP00000007337	LOC106588673	ENSSSAP00000007337	ENSSSAP00000085567	Nuclear GTPase SLIP-GC-like.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.506
ENSSSAP00000007337	LOC106603097	ENSSSAP00000007337	ENSSSAP00000011399	Nuclear GTPase SLIP-GC-like.	Voltage-gated potassium channel subunit beta-3-like isoform X4.	0.454
ENSSSAP00000007337	LOC106612605	ENSSSAP00000007337	ENSSSAP00000014520	Nuclear GTPase SLIP-GC-like.	Glutamate--cysteine ligase catalytic subunit-like isoform X2.	0.744
ENSSSAP00000007337	adhfe1	ENSSSAP00000007337	ENSSSAP00000086079	Nuclear GTPase SLIP-GC-like.	Hydroxyacid-oxoacid transhydrogenase, mitochondrial isoform X1.	0.473
ENSSSAP00000007337	dkga	ENSSSAP00000007337	ENSSSAP00000010111	Nuclear GTPase SLIP-GC-like.	2,5-diketo-D-gluconic acid reductase A isoform X1.	0.454
ENSSSAP00000007337	gsh1	ENSSSAP00000007337	ENSSSAP00000114202	Nuclear GTPase SLIP-GC-like.	Glutamate--cysteine ligase catalytic subunit isoform X1.	0.744
ENSSSAP00000007337	kcnab2	ENSSSAP00000007337	ENSSSAP00000011931	Nuclear GTPase SLIP-GC-like.	Voltage-gated potassium channel subunit beta-2 isoform X1.	0.454
ENSSSAP00000074558	ENSSSAP00000007337	ENSSSAP00000074558	ENSSSAP00000007337	Potassium voltage-gated channel, shaker-related subfamily, beta member 2 a.	Nuclear GTPase SLIP-GC-like.	0.454
ENSSSAP00000074558	LOC106588673	ENSSSAP00000074558	ENSSSAP00000085567	Potassium voltage-gated channel, shaker-related subfamily, beta member 2 a.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.579
ENSSSAP00000074558	adhfe1	ENSSSAP00000074558	ENSSSAP00000086079	Potassium voltage-gated channel, shaker-related subfamily, beta member 2 a.	Hydroxyacid-oxoacid transhydrogenase, mitochondrial isoform X1.	0.427
ENSSSAP00000074813	ENSSSAP00000007337	ENSSSAP00000074813	ENSSSAP00000007337	Potassium voltage-gated channel, shaker-related subfamily, beta member 1 a.	Nuclear GTPase SLIP-GC-like.	0.454
ENSSSAP00000074813	LOC106588673	ENSSSAP00000074813	ENSSSAP00000085567	Potassium voltage-gated channel, shaker-related subfamily, beta member 1 a.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.579
ENSSSAP00000074813	adhfe1	ENSSSAP00000074813	ENSSSAP00000086079	Potassium voltage-gated channel, shaker-related subfamily, beta member 1 a.	Hydroxyacid-oxoacid transhydrogenase, mitochondrial isoform X1.	0.427
LOC100194670	ENSSSAP00000007337	ENSSSAP00000075377	ENSSSAP00000007337	Aldo-keto reductase family 7 member A5-like.	Nuclear GTPase SLIP-GC-like.	0.454
LOC100194670	LOC106588673	ENSSSAP00000075377	ENSSSAP00000085567	Aldo-keto reductase family 7 member A5-like.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.579
LOC100194670	adhfe1	ENSSSAP00000075377	ENSSSAP00000086079	Aldo-keto reductase family 7 member A5-like.	Hydroxyacid-oxoacid transhydrogenase, mitochondrial isoform X1.	0.427
LOC106588673	ENSSSAP00000007337	ENSSSAP00000085567	ENSSSAP00000007337	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Nuclear GTPase SLIP-GC-like.	0.506