STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609240Aldose reductase-like. (328 aa)    
Predicted Functional Partners:
LOC106612605
Glutamate--cysteine ligase catalytic subunit-like isoform X2.
   
 0.744
gsh1
Glutamate--cysteine ligase catalytic subunit isoform X1.
   
 0.744
ENSSSAP00000106669
Zgc:110782.
  
 
 0.617
xylb
Xylulose kinase isoform X1.
  
  
 0.509
LOC106588673
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.506
tkfc
Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (Cyclizing).
   
  
 0.499
adhfe1
Hydroxyacid-oxoacid transhydrogenase, mitochondrial isoform X1.
  
 0.490
dhso
Sorbitol dehydrogenase.
  
 
 0.470
LOC106562152
Sorbitol dehydrogenase-like isoform X1.
  
 
 0.470
RBP2
Retinol-binding protein 2-like isoform X2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  0.468
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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