STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611138Protein phosphatase 1 regulatory subunit 21-like. (792 aa)    
Predicted Functional Partners:
rsph3
Radial spoke head protein 3 homolog.
    
   0.966
gatd1
Parkinson disease 7 domain-containing protein 1 isoform X2.
    
   0.903
LOC106575083
Quinone oxidoreductase-like protein 1 isoform X1.
    
   0.891
LOC100196748
Quinone oxidoreductase-like protein 1 isoform X1.
    
   0.891
LOC106603664
Dystrobrevin.
    
   0.834
ENSSSAP00000052591
annotation not available
    
   0.834
LOC106611333
Dystrobrevin beta-like isoform X2.
    
   0.834
LOC100195747
Dystrobrevin.
    
   0.834
dtna
Dystrobrevin.
    
   0.834
LOC106561360
Protein C12orf4 homolog isoform X1.
    
 
 0.707
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.