STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610857Zinc finger and BTB domain-containing protein 18.2-like isoform X1. (549 aa)    
Predicted Functional Partners:
LOC106591863
E3 ubiquitin-protein ligase RNF216-like.
    
 
 0.436
ENSSSAP00000046409
DNA (cytosine-5)-methyltransferase 3A-like.
    
 0.433
utp25
Digestive organ expansion factor homolog isoform X1.
      
 0.429
LOC106608478
Transcriptional-regulating factor 1-like.
    
 
 0.424
LOC106578136
Uncharacterized protein LOC106578136.
    
 
 0.424
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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