STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106579967Low density lipoprotein receptor adapter protein 1-B-like isoform X1. (323 aa)    
Predicted Functional Partners:
LOC100380745
AP-2 complex subunit beta.
    
 0.875
LOC106603458
AP complex subunit beta.
    
 0.875
LOC106584973
AP complex subunit beta.
    
 0.858
LOC106580331
AP complex subunit beta.
    
 0.858
LOC106611341
Intersectin-2-like.
    
  0.804
ENSSSAP00000067020
Intersectin 2b.
    
  0.804
LOC106611125
Apolipoprotein B-100-like.
     
 0.801
LOC100136579
Apolipoprotein B-100 isoform X1.
     
 0.801
LOC106585724
Very low-density lipoprotein receptor-like.
    
 0.762
ENSSSAP00000090201
annotation not available
    
 0.762
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.