STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RANGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (233 aa)    
Predicted Functional Partners:
LOC106594631
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.991
XPO5
Exportin-5-like.
    
 0.988
LOC106589781
Exportin-5-like.
    
 0.988
LOC100380723
Exportin-1.
   
 0.983
rcc1
Regulator of chromosome condensation isoform X1.
   
 0.981
ENSSSAP00000028410
annotation not available
   
 0.980
ENSSSAP00000025737
annotation not available
   
 0.979
LOC106582182
E3 SUMO-protein ligase RanBP2-like isoform X4.
   
 0.979
LOC106586530
E3 SUMO-protein ligase RanBP2-like isoform X1.
   
 0.979
ENSSSAP00000077141
annotation not available
   
 0.979
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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