STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000007649Catenin alpha-2-like. (365 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta-1.
   
 0.991
LOC106611807
Vinculin isoform X1.
    
0.967
VCL
Vinculin-like isoform X2.
    
0.967
LOC106604178
Vinculin-like isoform X2.
    
0.967
AFDN
Afadin-like isoform X5.
    
 0.937
LOC106603236
Afadin-like.
    
 0.937
LOC106600942
Alpha-actinin-1-like isoform X3.
   
 0.929
actn4
Alpha-actinin-4 isoform X1.
   
 0.929
LOC106612603
Alpha-actinin-4 isoform X3.
   
 0.929
tjp1
Tight junction protein ZO-1 isoform X3; Belongs to the MAGUK family.
   
 0.921
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.