STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000007657Transmembrane protein 187. (234 aa)    
Predicted Functional Partners:
gnl3l
Guanine nucleotide-binding protein-like 3-like protein.
      
 0.838
LOC106572920
methyl-CpG-binding protein 2-like isoform X1.
      
 0.808
LOC106566345
methyl-CpG-binding protein 2-like.
      
 0.808
GPHN
Gephyrin-like isoform X5.
      
 0.771
LOC106571666
Gephyrin.
      
 0.771
LOC106609131
Transportin-3-like.
      
 0.762
tnpo3
Transportin-3 isoform X1.
      
 0.762
LOC106566344
Interleukin-1 receptor-associated kinase 1-like isoform X1.
      
 0.671
LOC106602378
Signal peptidase complex subunit 3.
      
 0.564
spcs3
Signal peptidase complex subunit 3.
      
 0.564
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.