STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000007720annotation not available (752 aa)    
Predicted Functional Partners:
ENSSSAP00000042990
annotation not available
    
 0.767
ENSSSAP00000108073
annotation not available
  
     0.519
ENSSSAP00000001244
annotation not available
  
     0.513
ENSSSAP00000034661
annotation not available
  
     0.513
ENSSSAP00000022432
annotation not available
  
     0.507
ENSSSAP00000055690
annotation not available
  
     0.506
ENSSSAP00000047174
annotation not available
  
     0.498
ENSSSAP00000071856
annotation not available
  
     0.494
ENSSSAP00000031356
annotation not available
  
     0.491
LOC106587408
Retinitis pigmentosa 1-like 1 protein isoform X1.
    
 0.469
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.