STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605261WD repeat-containing protein mio isoform X2. (879 aa)    
Predicted Functional Partners:
depdc5
DEP domain-containing protein 5 isoform X4.
   
 0.998
sec13
Protein SEC13 homolog isoform X1; Belongs to the WD repeat SEC13 family.
    
 0.998
seh1l
Nucleoporin SEH1 isoform X4; Belongs to the WD repeat SEC13 family.
    
 0.998
LOC106578258
WD repeat-containing protein 24-like isoform X1.
    
 0.998
LOC106594566
Nucleoporin SEH1 isoform X1; Belongs to the WD repeat SEC13 family.
    
 0.998
wdr24
WD repeat-containing protein 24.
    
 0.998
ENSSSAP00000075469
Nucleoporin seh1-like.
    
 0.998
tusc4
Tumor suppressor candidate 4.
    
 0.994
LOC106601082
Nitrogen permease regulator 3-like protein isoform X1.
    
 0.994
nprl2
Nitrogen permease regulator 2-like protein isoform X1.
    
 0.994
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.