STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611756Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (196 aa)    
Predicted Functional Partners:
vrk3
Serine/threonine-protein kinase VRK3 isoform X1.
    
 0.580
LOC106587413
Inactive serine/threonine-protein kinase VRK3-like.
    
 0.580
ap3m1
AP-3 complex subunit mu-1 isoform X2; Belongs to the adaptor complexes medium subunit family.
   
 
 0.568
LOC106585102
AP-3 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family.
   
 
 0.568
smim12
Small integral membrane protein 12.
   
   0.557
mrm1
rRNA methyltransferase 1, mitochondrial.
  
  
 0.515
utp15
U3 small nucleolar RNA-associated protein 15 homolog.
   
  
 0.507
LOC106600714
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.504
LOC106592057
Mitogen-activated protein kinase 1-like.
   
 0.504
mapk1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.504
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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