STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610691Interphotoreceptor matrix proteoglycan 1-like. (807 aa)    
Predicted Functional Partners:
ENSSSAP00000080569
annotation not available
     
 0.597
LOC106570392
Endothelin-1-like.
     
 0.554
LOC106589028
Uncharacterized protein LOC106589028.
     
 0.554
idua
alpha-L-iduronidase isoform X1.
      
 0.532
ENSSSAP00000053484
Retinol binding protein 3.
   
  
 0.427
LOC106578999
Retinol-binding protein 3-like.
   
  
 0.427
LOC106589350
Retinol-binding protein 3-like.
   
  
 0.427
ENSSSAP00000116029
Retinol binding protein 3.
   
  
 0.427
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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