STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000007778Si:dkey-12j5.1. (358 aa)    
Predicted Functional Partners:
rl4a
60S ribosomal protein L4-A.
  
 
 0.955
RPL4
Ribosomal protein L4.
  
 
 0.955
mycbpap
MYCBP-associated protein.
  
 0.876
LOC106568020
Phosphoglycerate kinase.
  
 0.876
pgk
Phosphoglycerate kinase.
  
 0.876
grwd1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.839
ENSSSAP00000018028
annotation not available
   
  
 0.839
brix1
Brix domain-containing protein 2.
   
    0.836
tpi1b
Salmo salar triosephosphate isomerase 1b (tpi1b), mRNA.
  
 0.828
ENSSSAP00000089375
Triosephosphate isomerase 1a.
  
 0.828
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.