STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
k0020K0020 protein isoform X1. (646 aa)    
Predicted Functional Partners:
brix1
Brix domain-containing protein 2.
   
 
 0.993
rbm28
RNA-binding protein 28.
   
 
 0.991
RPF2
Ribosome production factor 2 homolog.
   
 
 0.989
LOC106571313
Ribosome production factor 2 homolog isoform X1.
   
 
 0.989
ENSSSAP00000092906
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.986
gtpbp4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.985
ENSSSAP00000085123
annotation not available
   
 
 0.985
LOC106579528
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.974
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 
 0.973
ebp2
Probable rRNA-processing protein EBP2.
   
 
 0.973
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.