STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000007784annotation not available (1556 aa)    
Predicted Functional Partners:
LOC106567721
RNA helicase.
    
 0.720
nol6
Nucleolar protein 6.
   
 
 0.702
rrp36
Ribosomal RNA processing protein 36 homolog.
   
   0.673
nop14
Nucleolar protein 14 isoform X1.
    
   0.665
utp25
Digestive organ expansion factor homolog isoform X1.
    
   0.665
imp3
U3 small nucleolar ribonucleoprotein protein IMP3.
    
   0.665
utp3
Something about silencing protein 10 isoform X2.
    
   0.665
ENSSSAP00000020264
annotation not available
    
 
 0.644
gpatch4
G patch domain-containing protein 4.
    
 
 0.644
LOC100196059
U3 small nucleolar RNA-associated protein 6 homolog.
    
 
 0.630
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.