STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ryr1Ryanodine receptor 1 isoform X14. (5002 aa)    
Predicted Functional Partners:
LOC106590366
Calponin homology domain-containing protein DDB_G0272472-like isoform X3.
   
 
 0.908
LOC106590200
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1-like.
     
 0.905
RYR3
Ryanodine receptor 3-like isoform X3.
  
  
0.903
RYR3-2
Ryanodine receptor 3-like isoform X9.
  
  
0.903
LOC106590199
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1-like.
     
  0.900
LOC106599166
Aspartyl/asparaginyl beta-hydroxylase-like isoform X1.
   
 
 0.871
ENSSSAP00000069269
FKBP prolyl isomerase 1B.
    
 0.839
fkbp1b
FK506 binding protein 1b.
    
 0.839
LOC106577953
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.814
LOC106600326
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.814
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.