STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLIC3Chloride intracellular channel 3. (226 aa)    
Predicted Functional Partners:
LOC106588901
Mitogen-activated protein kinase.
    
 
 0.611
LOC106570495
Mitogen-activated protein kinase.
    
 
 0.611
LOC106570069
Uncharacterized protein LOC106570069.
    
 0.565
ENSSSAP00000110677
annotation not available
    
 0.565
rftn2
Raftlin-2.
      
 0.465
LOC106582313
Raftlin-2-like.
      
 0.465
tmem141
Transmembrane protein 141.
      
 0.450
fam96a
MIP18 family protein FAM96A.
      
 0.442
cssa24h9orf64
Queuosine salvage protein; Involved in salvaging queuosine.
      
 0.438
hdhd2
Haloacid dehalogenase-like hydrolase domain-containing protein 2 isoform X1.
      
 0.418
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.