STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
piggGPI ethanolamine phosphate transferase 2 isoform X1. (973 aa)    
Predicted Functional Partners:
LOC106591465
Transmembrane emp24 domain-containing protein 10-like.
    
 
 0.898
TMEDA
Transmembrane emp24 domain-containing protein 10 precursor.
    
 
 0.898
LOC106608292
Transmembrane emp24 domain-containing protein 10-like.
    
 
 0.898
LOC106611044
Transmembrane emp24 domain-containing protein 10-like.
    
 
 0.898
pigf
Phosphatidylinositol-glycan biosynthesis class F protein isoform X1.
    
 0.880
pigf-2
Phosphatidylinositol glycan anchor biosynthesis class F.
    
 0.880
pgap1
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins. GPI inositol deacylation may important for efficient transport of GPI- anchored proteins from the endoplasmic reticulum to the Golgi.
   
 
 0.690
pigo
GPI ethanolamine phosphate transferase 3.
   
 
0.666
ENSSSAP00000030824
annotation not available
    
 
 0.648
LOC106594017
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 
 0.648
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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