STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106567323POU domain protein. (467 aa)    
Predicted Functional Partners:
LOC106572630
Sal-like protein 4 isoform X1.
   
 0.938
ENSSSAP00000074617
Sal-like protein 4.
   
 0.938
ctnnb1
Catenin beta-1.
    
 0.914
LOC106608953
Transcription factor Sox-19b-like.
    
 0.908
LOC106579626
Homeobox protein koza-like.
  
  
 0.897
LOC106584342
Transcription factor Sox-2-like.
    
 0.896
LOC106590258
Homeobox protein Dlx2a-like.
  
  
 0.896
LOC106582442
Transcription factor Sox-21-B-like.
    
 0.864
LOC106586270
Transcription factor Sox-21-B.
    
 0.864
LOC106574593
Transcription factor Sox-1a-like.
    
 0.856
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.