STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608435Uncharacterized protein LOC106608435. (600 aa)    
Predicted Functional Partners:
haao
3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.
   
 
 0.531
echs1
Enoyl Coenzyme A hydratase short chain 1 mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  
 0.525
ENSSSAP00000054831
NAD synthetase 1.
     
 0.524
nadsyn1
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
     
 0.524
oplah
5-oxoprolinase.
      
 0.499
asnsd1
Asparagine synthetase domain-containing protein 1 isoform X1.
     
 0.442
ENSSSAP00000104915
annotation not available
     
 0.442
rpl12
60S ribosomal protein L12 isoform X1; Belongs to the universal ribosomal protein uL11 family.
      
 0.439
ldhd
Probable D-lactate dehydrogenase, mitochondrial isoform X1.
      
 0.432
ENSSSAP00000018219
Kynurenine 3-monooxygenase.
   
 
 0.428
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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