STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608439Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (302 aa)    
Predicted Functional Partners:
pot1
Protection of telomeres protein 1 isoform X1.
    
 0.612
LOC106584980
Thyroid adenoma-associated protein homolog isoform X2.
      
 0.597
tisd
Thyroid adenoma-associated protein homolog.
      
 0.597
wrn
Werner syndrome ATP-dependent helicase isoform X2.
    
 0.596
rad50
DNA repair protein RAD50.
    
 0.518
LOC106563918
Nuclear pore complex protein Nup155-like isoform X1.
      
 0.511
tert
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 0.452
saks1
SAPK substrate protein 1 isoform X1.
      
 0.433
LOC106612087
UBX domain-containing protein 1-like.
      
 0.433
rfc3
Replication factor C subunit 3 isoform X1.
     
 0.420
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.