STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000007909TBC1 domain family member 9-like. (84 aa)    
Predicted Functional Partners:
gak
cyclin-G-associated kinase isoform X1.
   
 
  0.876
dnajc6
Putative tyrosine-protein phosphatase auxilin isoform X5.
   
 
  0.677
ENSSSAP00000119409
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 
  0.677
ap5m1
AP-5 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
     
 0.571
LOC106571395
Cation-independent mannose-6-phosphate receptor-like isoform X1.
   
 
  0.518
LOC106607799
Cation-independent mannose-6-phosphate receptor-like.
   
 
  0.518
snapin
SNARE-associated protein Snapin.
     
 0.517
LOC106569889
SNARE-associated protein Snapin-like isoform X1.
     
 0.517
ap4b1
AP-4 complex subunit beta-1.
   
 
  0.513
LOC106585118
Vesicle-associated membrane protein 8-like isoform X1.
     
 0.511
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.