STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106600851Beta-1,4 N-acetylgalactosaminyltransferase 1-like. (482 aa)    
Predicted Functional Partners:
LOC106609768
Cytidine monophosphate-N-acetylneuraminic acid hydroxylase-like.
      
 0.511
LOC106604887
Cytidine monophosphate-N-acetylneuraminic acid hydroxylase-like.
      
 0.511
LOC106582650
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.449
LOC106571235
Syndecan-1-like.
     
 0.449
LOC106565017
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.449
b4galt7
Beta-1,4-galactosyltransferase 7 isoform X5.
    
 
 0.429
LOC106612238
Beta-1,4-galactosyltransferase 7-like isoform X4.
    
 
 0.429
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.